BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB030F09SP1|AL429259
(922 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1096 1463 0.0
>3x_Contig1096
Length = 4235
Score = 1463 bits (720), Expect = 0.0
Identities = 858/923 (92%), Gaps = 2/923 (0%)
Strand = Plus / Minus
Query: 1 tgttcttgtctgtctccgtaattgatgatgaattacgacgattttggggatctttctcaa 60
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 956 tgttcttgtctgtttccgtaattgatgatgaattacgacgattttggggatctttctcaa 897
Query: 61 tcagtggtaatatgagtsttccacgtcttaatggctggctgtgtttttgtctggacatgc 120
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 896 tcagtggtaatatgagttttccacgtcttaatggctggctgtgtttttgtctggacatgc 837
Query: 121 attatgaaggactcatgatggaagaytttcaattggatatyatatgtatatycmattcgc 180
||||||||||||||||||||||||| |||||||||||||| |||||||||| | ||||||
Sbjct: 836 attatgaaggactcatgatggaagattttcaattggatattatatgtatattcaattcgc 777
Query: 181 ctttatatacatgtatatgtttaaatatataaahmaatataaamvcshcyaggcyccgaa 240
||||||||||||||||||||||||||||||||| ||||||| | ||| | |||
Sbjct: 776 ctttatatacatgtatatgtttaaatatataaatatatataaatatgtctaggttctgaa 717
Query: 241 caaagtttggacattaactcsgtacttaaatcgygttyatygtagtcatyattyayctyy 300
|||||||||||||||||||| |||||||||| | ||| || |||||||| ||| | |
Sbjct: 716 caaagtttggacattaactcggtacttaaattgtgtttattgtagtcattatttattttt 657
Query: 301 ycatttacgtctggsgctctgtatctycatatgcmttgcctgcctcaagccgaatgcccc 360
||||||||||||| | | ||||| | ||||||| |||||||||||||||||||||| ||
Sbjct: 656 tcatttacgtctggtgtt-tgtattttcatatgcattgcctgcctcaagccgaatgctcc 598
Query: 361 aatgcccaagtcattgagaaagaaggttcattcttccagtacgtcttgtaataagtcgtn 420
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 597 aatgcccaagtcattgagaaagaaggttcattcttccagtacgtcttgtaataagtcgtt 538
Query: 421 caaatgtcaagggtttggggattgtcgcatggmatccacmmgacaagaacmccccgcmag 480
|||||||||||||||||| ||||||||||||| || ||| ||||||||| | || ||
Sbjct: 537 caaatgtcaagggtttggtgattgtcgcatggaattcacaagacaagaacatcttgcaag 478
Query: 481 acataacaggaaacatacgggtgaacaaccgtctcaatgccatccgtgtctcaggttctt 540
||||| |||||||||||||||||||||||||| ||||||||||| |||||| ||||||||
Sbjct: 477 acatatcaggaaacatacgggtgaacaaccgtttcaatgccatctgtgtcttaggttctt 418
Query: 541 ttctaggttggataatctgamacaacatgtggaatcggtgcattccgtgtcganggccac 600
|||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||
Sbjct: 417 ttctaggttggataatctgaaacaacatgtggaatcggtgcattccgtgtcgatggccac 358
Query: 601 gncccagtngaaaaactccaagagtacggccccatgttgcccaggaactggtactggtac 660
| | |||| |||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 357 gtctcagttgaaaaattccaagagtacggccccatgttgcccaggaactggtactggtac 298
Query: 661 cagttccagtactactgcttcaccgccaacaccagaggtg-tggagnagtctagcaattg 719
|||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||
Sbjct: 297 cagttccagtactactgcttcaccgccaacaccagaggtgttggcagagtctagcaattg 238
Query: 720 cagcagtgcctgcaatgacaacmcgtgctcgtcccattctatcgagggcctccaacaacc 779
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 237 cagcagtgcctgcaatgacaacccgtgctcgtcccattctatcgagggcctccaacaacc 178
Query: 780 tttgcctgccaaaccggcttctggtgtgttccaaccgtttttggacgtgaagagtacgaa 839
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 177 tttgcctgccaaaccggcttctggtgtgttccaaccgtttttggacgtgaagagtacgaa 118
Query: 840 tagtaacccgcacctgtctccgttgtcgacagcmtcgtcattttctgcgttagggtacag 899
||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||
Sbjct: 117 tagtaacccgcacctgtctccgttgtcgacagcttcgtcattttctgcgtcagggtacag 58
Query: 900 gtctgcgtccttaccattgttgc 922
|||||||||||||||||||||||
Sbjct: 57 gtctgcgtccttaccattgttgc 35
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.41 0.716 1.33
Gapped
Lambda K H
1.41 0.716 1.33
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3829
Number of Sequences: 1807
Number of extensions: 3829
Number of successful extensions: 90
Number of sequences better than 1.0e-20: 1
length of query: 922
length of database: 10,358,551
effective HSP length: 16
effective length of query: 906
effective length of database: 10,329,639
effective search space: 9358652934
effective search space used: 9358652934
T: 0
A: 40
X1: 5 (10.2 bits)
X2: 14 (28.4 bits)
S1: 12 (24.9 bits)
S2: 49 (100.0 bits)